MLOC_48760 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1395360.2412960.171998
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.1992370.08927690.7743570.377281
INF2Developing inflorescences (1-1.5 cm)0.52682300.553620.345938
ROORoots from the seedlings (10 cm shoot stage)00.097504100.226244
NODDeveloping tillers at six leaf stage, 3rd internode00.02777080.1610710.278266
CAR5Developing grain, bracts removed (5 DPA)0.2016850.395470.1191170.274984
CAR15Developing grain, bracts removed (15 DPA)0.6394430.1491840.4946981.29246



CDS Structure of MLOC_48760






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48760.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48760.1CUST_6880_PI427708083AvailableAvailablecontig_329140 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58080.1 -1 1e-10 60 28/39 (72%) 13104.m06092 protein polygalacturonase inhibitor 3 precursor, putative, expressed
TAIR PP10None-----