MLOC_4875 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4875_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4875_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.7501 | 11.3806 | 10.1501 | 12.9559 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.91565 | 0.551725 | 1.40506 | 1.90212 |
INF1 | Young developing inflorescences (5mm) | 22.7148 | 27.0267 | 22.2802 | 24.9219 |
INF2 | Developing inflorescences (1-1.5 cm) | 16.8808 | 26.0637 | 19.9821 | 30.5669 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.34609 | 6.36485 | 8.63022 | 9.53606 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.18126 | 0.0822538 | 0.117731 | 0.269746 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.6835 | 9.42492 | 9.04206 | 11.8287 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.565611 | 0.402729 | 0.738248 | 1.57183 |
CDS Structure of MLOC_4875
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4875.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g04550.1 |
+2 |
2e-83 |
270 |
245/415 (59%) |
13103.m00469 protein expressed protein |
TAIR PP10 |
AT1G04030.1 |
+2 |
8e-15 |
77 |
62/166 (37%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). | chr1:1040597-1042313 FORWARD LENGTH=434 |