MLOC_48741 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1028630.4165040.3314580.349147
LEAShoots from the seedlings (10 cm shoot stage)0.1290220.6300620.4187750.340136
INF1Young developing inflorescences (5mm)0.9877490.7581470.7800260.768263
INF2Developing inflorescences (1-1.5 cm)1.297131.012771.002191.2718
ROORoots from the seedlings (10 cm shoot stage)0.3920540.8030430.5588850.807337
NODDeveloping tillers at six leaf stage, 3rd internode0.3310930.2762912.034221.67325
CAR5Developing grain, bracts removed (5 DPA)0.7894930.8771231.096560.946497
CAR15Developing grain, bracts removed (15 DPA)0.09482320.1477920.09177790.303935



CDS Structure of MLOC_48741






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356167
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356167CUST_19624_PI427708080NoneNoneNone
MLOC_29765.1NoneAvailableNonecontig_2035179 (Not mapped)
MLOC_30754.1NoneAvailableNonecontig_2123438 (Not mapped)
MLOC_31527.1NoneAvailableNonecontig_2198182 (Not mapped)
MLOC_32933.1NoneAvailableNonecontig_2330526 (Not mapped)
MLOC_33012.1NoneAvailableNonecontig_2337217 (Not mapped)
MLOC_33870.1NoneAvailableNonecontig_2410530 (Not mapped)
MLOC_34335.1NoneAvailableNonecontig_2435919 (Not mapped)
MLOC_38890.1NoneAvailableNonecontig_2551659 (Not mapped)
MLOC_42246.1NoneAvailableNonecontig_2633149 (Not mapped)
MLOC_43581.1NoneAvailableNonecontig_271459 (Mapped)
MLOC_48741.1NoneAvailableAvailablecontig_328857 (Mapped)
MLOC_68961.1NoneAvailableNonecontig_556477 (Not mapped)
MLOC_75544.1NoneAvailableNonecontig_681862 (Not mapped)
MLOC_75800.1NoneAvailableNonecontig_6898 (Mapped)
MLOC_77660.1NoneAvailableNonecontig_766286 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----