MLOC_48739 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.782061.975914.458022.31745
LEAShoots from the seedlings (10 cm shoot stage)3.084671.813814.036122.04714
INF1Young developing inflorescences (5mm)3.82118.386548.018743.80697
INF2Developing inflorescences (1-1.5 cm)7.448947.821715.40436.15755
ROORoots from the seedlings (10 cm shoot stage)1.889032.490063.960472.19153
NODDeveloping tillers at six leaf stage, 3rd internode1.095022.215643.291385.62528
CAR5Developing grain, bracts removed (5 DPA)2.401863.276742.597342.06013
CAR15Developing grain, bracts removed (15 DPA)0.6980631.242791.043471.63522



CDS Structure of MLOC_48739






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK368446
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368446NoneNoneNoneNone
MLOC_28855.1NoneAvailableNonecontig_195311 (Mapped)
MLOC_32455.1NoneAvailableNonecontig_228766 (Mapped)
MLOC_33806.1NoneAvailableNonecontig_24044 (Not mapped)
MLOC_34077.1NoneAvailableNonecontig_2423037 (Not mapped)
MLOC_41526.1NoneAvailableNonecontig_2592888 (Mapped)
MLOC_45960.1NoneAvailableNonecontig_283609 (Mapped)
MLOC_48739.1NoneAvailableAvailablecontig_328847 (Not mapped)
MLOC_54164.1NoneAvailableNonecontig_389339 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----