- Predicted Gene MLOC_48727
MLOC_48727 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48727_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48727_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.3848 | 15.0928 | 15.7742 | 10.7378 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 13.2662 | 7.62966 | 6.59938 | 6.84486 |
INF1 | Young developing inflorescences (5mm) | 22.776 | 27.2112 | 36.0445 | 17.6879 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.8636 | 35.1796 | 33.4663 | 30.4652 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.913 | 13.8448 | 16.1407 | 12.8335 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.06382 | 7.1022 | 5.07333 | 18.17 |
CAR5 | Developing grain, bracts removed (5 DPA) | 28.3646 | 26.9661 | 30.9551 | 21.2612 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.41143 | 5.74037 | 9.95135 | 14.9869 |
CDS Structure of MLOC_48727
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48727.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g38010.1 |
-3 |
8e-14 |
71 |
37/63 (59%) |
13103.m04132 protein nuf2 family protein, expressed |
TAIR PP10 | None | - | - | - | - | - |