MLOC_48727 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.384815.092815.774210.7378
LEAShoots from the seedlings (10 cm shoot stage)13.26627.629666.599386.84486
INF1Young developing inflorescences (5mm)22.77627.211236.044517.6879
INF2Developing inflorescences (1-1.5 cm)33.863635.179633.466330.4652
ROORoots from the seedlings (10 cm shoot stage)11.91313.844816.140712.8335
NODDeveloping tillers at six leaf stage, 3rd internode5.063827.10225.0733318.17
CAR5Developing grain, bracts removed (5 DPA)28.364626.966130.955121.2612
CAR15Developing grain, bracts removed (15 DPA)9.411435.740379.9513514.9869



CDS Structure of MLOC_48727






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48727.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48727.1CUST_12603_PI427708083AvailableAvailablecontig_328638 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38010.1 -3 8e-14 71 37/63 (59%) 13103.m04132 protein nuf2 family protein, expressed
TAIR PP10None-----