- Predicted Gene MLOC_48709
MLOC_48709 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.60135 | 11.7423 | 12.0555 | 11.1316 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.46012 | 5.84412 | 7.47735 | 6.47626 |
| INF1 | Young developing inflorescences (5mm) | 27.2112 | 26.5953 | 24.7848 | 21.6642 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.9137 | 23.25 | 22.6467 | 24.5886 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.69229 | 12.3633 | 9.58791 | 13.4317 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.307133 | 0.73198 | 1.11865 | 2.60521 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.4992 | 13.3024 | 13.622 | 12.9955 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.77562 | 3.71936 | 3.39823 | 8.12734 |
CDS Structure of MLOC_48709
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48709.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g44320.1 |
-1 |
0.0 |
1508 |
790/889 (89%) |
13105.m04682 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT1G15440.1 |
-1 |
0.0 |
1131 |
587/896 (66%) |
| Symbols: PWP2, ATPWP2 | periodic tryptophan protein 2 | chr1:5306159-5309460 REVERSE LENGTH=900 |