MLOC_48674 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.351142.979452.406380
LEAShoots from the seedlings (10 cm shoot stage)4.187161.090022.672340
INF1Young developing inflorescences (5mm)7.737885.95014.186720
INF2Developing inflorescences (1-1.5 cm)3.493622.24092.775230
ROORoots from the seedlings (10 cm shoot stage)4.879162.984613.175720
NODDeveloping tillers at six leaf stage, 3rd internode1.965641.877132.526580
CAR5Developing grain, bracts removed (5 DPA)2.791132.331841.387430
CAR15Developing grain, bracts removed (15 DPA)1.786711.012371.002080



CDS Structure of MLOC_48674






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371135
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371135CUST_22077_PI427708080NoneNoneNone
MLOC_24444.1NoneAvailableNonecontig_1644990 (Mapped)
MLOC_24445.1NoneAvailableNonecontig_1644990 (Mapped)
MLOC_328.1NoneAvailableNonecontig_102325 (Mapped)
MLOC_48674.1NoneAvailableNonecontig_32776 (Not mapped)
MLOC_7528.1NoneAvailableAvailablecontig_139463 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----