MLOC_48661 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.595247.99449.66410
LEAShoots from the seedlings (10 cm shoot stage)33.81089.5788214.85050
INF1Young developing inflorescences (5mm)10.826510.671210.62960
INF2Developing inflorescences (1-1.5 cm)12.408510.756211.15510
ROORoots from the seedlings (10 cm shoot stage)28.741521.87216.34280
NODDeveloping tillers at six leaf stage, 3rd internode42.389433.525617.52650
CAR5Developing grain, bracts removed (5 DPA)71.866971.865366.85670
CAR15Developing grain, bracts removed (15 DPA)2.12261.845932.859580



CDS Structure of MLOC_48661






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250051.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250051.1CUST_18785_PI427708080NoneNoneNone
MLOC_165.1NoneAvailableAvailablecontig_101076 (Mapped)
MLOC_25021.1NoneAvailableNonecontig_166666 (Mapped)
MLOC_28516.2NoneAvailableNonecontig_192579 (Not mapped)
MLOC_32658.1NoneAvailableNonecontig_23072 (Not mapped)
MLOC_48661.2NoneAvailableNonecontig_327541 (Mapped)
MLOC_8314.1NoneAvailableNonecontig_141984 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----