MLOC_48656 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.416381.072140
LEAShoots from the seedlings (10 cm shoot stage)4.883476.6941300
INF1Young developing inflorescences (5mm)4.626542.038173.352550
INF2Developing inflorescences (1-1.5 cm)7.156867.300686.160180
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.6001670.3602350.1783520
CAR5Developing grain, bracts removed (5 DPA)5.448851.820565.077720
CAR15Developing grain, bracts removed (15 DPA)0.69649701.049260



CDS Structure of MLOC_48656






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367199
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367199CUST_21427_PI427708080NoneNoneNone
MLOC_27900.1NoneAvailableNonecontig_187237 (Mapped)
MLOC_48656.1NoneAvailableNonecontig_32745 (Not mapped)
MLOC_57353.2NoneAvailableAvailablecontig_41671 (Mapped)
MLOC_78159.2NoneAvailableNonecontig_78946 (Mapped)
MLOC_9698.1NoneAvailableNonecontig_154750 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----