MLOC_48623 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.807798.2665220.86480
LEAShoots from the seedlings (10 cm shoot stage)19.642118.649632.39160
INF1Young developing inflorescences (5mm)22.904120.478429.87260
INF2Developing inflorescences (1-1.5 cm)32.719732.558424.6410
ROORoots from the seedlings (10 cm shoot stage)14.77412.251517.78730
NODDeveloping tillers at six leaf stage, 3rd internode35.04760.27647.96680
CAR5Developing grain, bracts removed (5 DPA)7.109584.670564.723680
CAR15Developing grain, bracts removed (15 DPA)6.900061.817700



CDS Structure of MLOC_48623






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK371411
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371411CUST_22128_PI427708080NoneNoneNone
MLOC_26521.2NoneAvailableNonecontig_176217 (Mapped)
MLOC_41426.1NoneAvailableNonecontig_2588012 (Not mapped)
MLOC_47093.1NoneAvailableNonecontig_300552 (Not mapped)
MLOC_48623.1NoneAvailableNonecontig_326788 (Mapped)
MLOC_50096.1NoneAvailableNonecontig_354408 (Mapped)
MLOC_52843.1NoneAvailableAvailablecontig_37844 (Mapped)
MLOC_58971.1NoneAvailableNonecontig_431680 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----