MLOC_48609 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.16268.2429.239720
LEAShoots from the seedlings (10 cm shoot stage)8.128318.782899.77630
INF1Young developing inflorescences (5mm)9.394311.350810.29940
INF2Developing inflorescences (1-1.5 cm)10.740711.78019.424990
ROORoots from the seedlings (10 cm shoot stage)9.833628.495036.794070
NODDeveloping tillers at six leaf stage, 3rd internode7.410094.219634.155560
CAR5Developing grain, bracts removed (5 DPA)5.191595.03356.048370
CAR15Developing grain, bracts removed (15 DPA)0.3202250.4867110.480250



CDS Structure of MLOC_48609






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK373304
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373304CUST_13854_PI427708083NoneNoneNone
MLOC_41172.1NoneAvailableNonecontig_2575161 (Not mapped)
MLOC_48609.1NoneAvailableNonecontig_326599 (Not mapped)
MLOC_51586.1NoneAvailableNonecontig_369777 (Not mapped)
MLOC_81713.1NoneAvailableAvailablecontig_97847 (Mapped)
MLOC_81715.1NoneAvailableNonecontig_97847 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----