MLOC_4860 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0721308000.0948745
LEAShoots from the seedlings (10 cm shoot stage)00.060554200.0397573
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.049544900.02818480.0592995
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.007963340.0165361
CAR5Developing grain, bracts removed (5 DPA)63.711769.286565.941261.9247
CAR15Developing grain, bracts removed (15 DPA)2.143172.495772.947396.11434



CDS Structure of MLOC_4860






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4860.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372388NoneNoneNoneNone
MLOC_4860.1CUST_39_PI427708083AvailableAvailablecontig_135588 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49420.1 +3 2e-22 99 78/152 (51%) 13102.m05603 protein fasciclin-like arabinogalactan precursor protein, putative, expressed
TAIR PP10 AT5G55730.2 +3 6e-15 77 63/152 (41%) | Symbols: FLA1 | FASCICLIN-like arabinogalactan 1 | chr5:22558375-22560392 REVERSE LENGTH=424