MLOC_48598 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.157790.4065050.2832030
LEAShoots from the seedlings (10 cm shoot stage)37.64383.4285310.44120
INF1Young developing inflorescences (5mm)0.532802000
INF2Developing inflorescences (1-1.5 cm)0.4704610.1521450.4056050
ROORoots from the seedlings (10 cm shoot stage)0.7797970.2330711.233980
NODDeveloping tillers at six leaf stage, 3rd internode659.461688.0610.7346040
CAR5Developing grain, bracts removed (5 DPA)00.18114600
CAR15Developing grain, bracts removed (15 DPA)1.606930.433862.043890



CDS Structure of MLOC_48598






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248887.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248887.1CUST_13546_PI427708083NoneNoneNone
MLOC_1725.1NoneAvailableNonecontig_11543 (Not mapped)
MLOC_25181.2NoneAvailableNonecontig_167554 (Mapped)
MLOC_45633.1NoneAvailableAvailablecontig_279599 (Not mapped)
MLOC_48598.1NoneAvailableNonecontig_326526 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----