MLOC_48590 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.992863.804436.042010
LEAShoots from the seedlings (10 cm shoot stage)5.518223.004817.159730
INF1Young developing inflorescences (5mm)6.958888.6494512.76370
INF2Developing inflorescences (1-1.5 cm)13.386612.69110.01840
ROORoots from the seedlings (10 cm shoot stage)2.523926.373831.811420
NODDeveloping tillers at six leaf stage, 3rd internode6.2366911.626415.76970
CAR5Developing grain, bracts removed (5 DPA)12.154210.48779.517690
CAR15Developing grain, bracts removed (15 DPA)3.372354.82272.370620



CDS Structure of MLOC_48590






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK370157
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370157CUST_25420_PI427708080NoneNoneNone
MLOC_32390.1NoneAvailableNonecontig_2281795 (Not mapped)
MLOC_45916.1NoneAvailableAvailablecontig_283083 (Not mapped)
MLOC_48590.1NoneAvailableNonecontig_326406 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----