MLOC_48589 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.174021.420481.449951.57028
LEAShoots from the seedlings (10 cm shoot stage)00.63496100.582185
INF1Young developing inflorescences (5mm)0.267564000.248084
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)00.4071920.9709941.00149
NODDeveloping tillers at six leaf stage, 3rd internode000.1133090.240201
CAR5Developing grain, bracts removed (5 DPA)0.7064740.3259100.546161
CAR15Developing grain, bracts removed (15 DPA)0.26422600.4030410.730509



CDS Structure of MLOC_48589






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48589.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48589.1CUST_6852_PI427708083AvailableAvailablecontig_326371 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g38772.1 +1 2e-33 119 54/69 (78%) 13109.m03873 protein MOSC domain-containing protein, mitochondrial precursor, putative, expressed
TAIR PP10 AT1G30910.1 +1 1e-27 102 44/69 (64%) Molybdenum cofactor sulfurase family protein | chr1:11000912-11002801 FORWARD LENGTH=318