MLOC_4855 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.533743.707634.528844.03549
LEAShoots from the seedlings (10 cm shoot stage)1.150910.1074560.5460780.527515
INF1Young developing inflorescences (5mm)0.7514030.8001041.178260.673467
INF2Developing inflorescences (1-1.5 cm)2.188192.157523.074212.35679
ROORoots from the seedlings (10 cm shoot stage)2.416242.018661.977192.30747
NODDeveloping tillers at six leaf stage, 3rd internode6.2576311.44467.4173231.4764
CAR5Developing grain, bracts removed (5 DPA)64.814471.173572.856360.7264
CAR15Developing grain, bracts removed (15 DPA)72.214573.544350.3095142.2



CDS Structure of MLOC_4855






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4855.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4855.1CUST_6843_PI427708083AvailableAvailablecontig_135580 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g03680.1 +2 4e-92 285 147/238 (62%) 13109.m00292 protein ankyrin, putative, expressed
TAIR PP10 AT3G04710.1 +2 1e-43 158 96/249 (39%) | Symbols: TPR10 | ankyrin repeat family protein | chr3:1278229-1280942 FORWARD LENGTH=456