MLOC_48539 FPKM values

FPKM by Treatment	FPKM by Replicate

Treatment ID	Treatment Description	Rep 1 FPKM	Rep 2 FPKM	Rep 3 FPKM	Treatment FPKM
EMB	4-day embryos dissected from germinating grains	7.35723	20.3967	11.7571	19.2517
LEA	Shoots from the seedlings (10 cm shoot stage)	16.5708	5.72862	4.82485	8.32543
INF1	Young developing inflorescences (5mm)	13.0323	15.0797	21.765	17.4728
INF2	Developing inflorescences (1-1.5 cm)	12.5914	16.9962	21.1487	22.5374
ROO	Roots from the seedlings (10 cm shoot stage)	8.56094	9.97319	15.772	15.8717
NOD	Developing tillers at six leaf stage, 3rd internode	55.9406	12.2268	36.9881	61.251
CAR5	Developing grain, bracts removed (5 DPA)	8.69577	15.6014	15.854	17.1386
CAR15	Developing grain, bracts removed (15 DPA)	2.81157	1.9521	2.92317	7.32635

CDS Structure of MLOC_48539

Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48539.1

Cluster member	Probe ID	FPKM by replicate	FPKM by treatment	Source Contig
MLOC_48539.1	CUST_6841_PI427708083	Available	Available	contig_325539 (Not mapped)

Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

Database	Hit	Frame	E-value	Score	% Identity	Description
Rice PP6	LOC_Os01g64920.1	+1	2e-22	89	44/45 (98%)	13101.m07004 protein nuclear matrix protein 1, putative, expressed
TAIR PP10	AT5G17620.1	+1	1e-18	78	36/45 (80%)	CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5805934-5808455 REVERSE LENGTH=329