MLOC_48495 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.881926.08724.912365.66714
LEAShoots from the seedlings (10 cm shoot stage)12.49215.687095.01956.69761
INF1Young developing inflorescences (5mm)14.064412.228416.01311.304
INF2Developing inflorescences (1-1.5 cm)13.346713.507713.835514.0796
ROORoots from the seedlings (10 cm shoot stage)7.018585.414638.454937.03257
NODDeveloping tillers at six leaf stage, 3rd internode5.380536.0836813.874724.2405
CAR5Developing grain, bracts removed (5 DPA)5.301056.030767.025775.57485
CAR15Developing grain, bracts removed (15 DPA)10.50949.3733712.977923.252



CDS Structure of MLOC_48495






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48495.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48495.2CUST_12552_PI427708080AvailableAvailablecontig_324737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g03210.1 -2 3e-76 245 146/322 (45%) 13109.m00243 protein expressed protein
TAIR PP10None-----