MLOC_4849 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.092341 | 0.664012 | 0.488046 | 0.45133 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 143.536 | 173.367 | 198.303 | 133.203 |
| INF1 | Young developing inflorescences (5mm) | 0.130624 | 0.220621 | 0 | 0.163812 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.282908 | 0.182096 | 0.157427 | 0.236944 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.743637 | 1.36119 | 1.14011 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 53.1065 | 38.5112 | 49.0244 | 111.931 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.41457 | 8.15363 | 9.67876 | 8.51254 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.821534 | 1.10044 | 1.57976 | 2.52622 |
CDS Structure of MLOC_4849
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4849.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g52240.1 |
+1 |
6e-170 |
483 |
232/249 (93%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
| TAIR PP10 |
AT2G34420.1 |
+1 |
5e-158 |
452 |
225/253 (89%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |
