- Predicted Gene MLOC_48452
MLOC_48452 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.11822 | 7.82622 | 6.31414 | 5.27612 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.3716 | 5.65571 | 6.64081 | 4.43269 |
| INF1 | Young developing inflorescences (5mm) | 30.2875 | 29.4897 | 34.1591 | 20.1644 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.8284 | 33.0635 | 35.2873 | 32.4829 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.83314 | 5.99769 | 5.80053 | 5.12207 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.13697 | 2.80857 | 9.39925 | 10.4835 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.23243 | 8.71809 | 8.7055 | 6.82412 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.12641 | 5.00136 | 5.44517 | 8.14167 |
CDS Structure of MLOC_48452
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48452.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g51790.2 |
-2 |
7e-39 |
147 |
76/146 (52%) |
13105.m05601 protein RecF/RecN/SMC N terminal domain containing protein, expressed |
| TAIR PP10 |
AT5G15920.1 |
-2 |
2e-28 |
115 |
54/102 (53%) |
| Symbols: SMC5 | structural maintenance of chromosomes 5 | chr5:5196210-5199559 FORWARD LENGTH=1053 |