MLOC_48446 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.322461.997013.915450
LEAShoots from the seedlings (10 cm shoot stage)5.12511.767216.225970
INF1Young developing inflorescences (5mm)3.429335.077866.484360
INF2Developing inflorescences (1-1.5 cm)5.438864.534297.677170
ROORoots from the seedlings (10 cm shoot stage)3.184293.211933.129270
NODDeveloping tillers at six leaf stage, 3rd internode5.027657.018727.985420
CAR5Developing grain, bracts removed (5 DPA)5.747137.11884.766560
CAR15Developing grain, bracts removed (15 DPA)2.414521.304192.322120



CDS Structure of MLOC_48446






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK376299
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376299NoneNoneNoneNone
MLOC_46039.1NoneAvailableAvailablecontig_284599 (Not mapped)
MLOC_48446.1NoneAvailableNonecontig_323904 (Not mapped)
MLOC_65716.1NoneAvailableNonecontig_505689 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----