MLOC_48435 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.5811170.2506330
LEAShoots from the seedlings (10 cm shoot stage)0.5806510.6916250.3610660
INF1Young developing inflorescences (5mm)0.5618070.1609670.1755630
INF2Developing inflorescences (1-1.5 cm)00.44025100
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode1.411692.063865.188890
CAR5Developing grain, bracts removed (5 DPA)0.74438800.3472280
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_48435






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360340
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360340CUST_20203_PI427708080NoneNoneNone
MLOC_28725.1NoneAvailableNonecontig_194364 (Not mapped)
MLOC_37738.1NoneAvailableAvailablecontig_2548987 (Mapped)
MLOC_41941.1NoneAvailableNonecontig_261486 (Mapped)
MLOC_48435.1NoneAvailableNonecontig_323706 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----