MLOC_4843 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.428592.365981.980422.27982
LEAShoots from the seedlings (10 cm shoot stage)1.441860.7955570.5076580.773841
INF1Young developing inflorescences (5mm)9.236618.9312811.37788.66388
INF2Developing inflorescences (1-1.5 cm)16.43714.734616.517317.8572
ROORoots from the seedlings (10 cm shoot stage)2.733652.87194.670833.55751
NODDeveloping tillers at six leaf stage, 3rd internode0.1175540.301070.1971360.912476
CAR5Developing grain, bracts removed (5 DPA)3.744724.332993.888654.0572
CAR15Developing grain, bracts removed (15 DPA)0.8849910.639830.8561981.9437



CDS Structure of MLOC_4843






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4843.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4843.1CUST_12546_PI427708080AvailableAvailablecontig_135566 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47180.2 +2 0.0 852 418/456 (92%) 13102.m05308 protein WD repeat-containing protein, putative, expressed
TAIR PP10 AT4G33270.1 +2 0.0 647 325/457 (71%) | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457