MLOC_48427 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.98624.63183.424782.87784
LEAShoots from the seedlings (10 cm shoot stage)6.456284.842199.541024.6856
INF1Young developing inflorescences (5mm)4.275188.168489.153873.94798
INF2Developing inflorescences (1-1.5 cm)13.54276.391387.948798.04173
ROORoots from the seedlings (10 cm shoot stage)0.4341894.289349.296983.41994
NODDeveloping tillers at six leaf stage, 3rd internode4.380615.503986.3638915.1181
CAR5Developing grain, bracts removed (5 DPA)5.257156.602938.517474.35384
CAR15Developing grain, bracts removed (15 DPA)1.825861.315623.480033.29974



CDS Structure of MLOC_48427






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK366474
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366474NoneNoneNoneNone
MLOC_27817.1NoneAvailableNonecontig_1865293 (Mapped)
MLOC_31158.1NoneAvailableNonecontig_2162393 (Not mapped)
MLOC_33299.1NoneAvailableNonecontig_2361492 (Mapped)
MLOC_35383.1NoneAvailableNonecontig_2479947 (Not mapped)
MLOC_47018.1NoneAvailableNonecontig_299369 (Not mapped)
MLOC_48427.1NoneAvailableAvailablecontig_323524 (Mapped)
MLOC_9685.1NoneAvailableNonecontig_1546237 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----