MLOC_48386 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3867330.3391690.2807570.460878
LEAShoots from the seedlings (10 cm shoot stage)0.337280.31355400.57569
INF1Young developing inflorescences (5mm)0.1465820.34644900.2222
INF2Developing inflorescences (1-1.5 cm)0.5733320.4205620.6450570.876672
ROORoots from the seedlings (10 cm shoot stage)0.343955000.135506
NODDeveloping tillers at six leaf stage, 3rd internode0.3244910.324510.4043612.1611
CAR5Developing grain, bracts removed (5 DPA)0.638728000.361425
CAR15Developing grain, bracts removed (15 DPA)0.184970.1664160.2254010.620995



CDS Structure of MLOC_48386






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48386.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48386.1CUST_12540_PI427708080AvailableAvailablecontig_322595 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59000.1 -3 5e-14 70 31/49 (63%) 13104.m06215 protein protein kinase family protein, putative, expressed
TAIR PP10None-----