MLOC_48385 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3390741.103681.435450
LEAShoots from the seedlings (10 cm shoot stage)2.124243.127352.520740
INF1Young developing inflorescences (5mm)0.7756871.196842.489190
INF2Developing inflorescences (1-1.5 cm)2.695031.916341.467830
ROORoots from the seedlings (10 cm shoot stage)1.617470.3419260.6171670
NODDeveloping tillers at six leaf stage, 3rd internode1.297050.5550140.7283080
CAR5Developing grain, bracts removed (5 DPA)0.7187891.339971.346990
CAR15Developing grain, bracts removed (15 DPA)0.7089530.5868830.4052080



CDS Structure of MLOC_48385






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK377013
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377013CUST_14459_PI427708083NoneNoneNone
MLOC_26240.1NoneAvailableNonecontig_17435 (Not mapped)
MLOC_26458.1NoneAvailableAvailablecontig_175716 (Mapped)
MLOC_2765.1NoneAvailableNonecontig_1246268 (Not mapped)
MLOC_33171.1NoneAvailableNonecontig_235012 (Mapped)
MLOC_48385.3NoneAvailableNonecontig_322595 (Not mapped)
MLOC_49074.1NoneAvailableNonecontig_335010 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----