MLOC_48347 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.138435.804449.031328.41028
LEAShoots from the seedlings (10 cm shoot stage)4.1609219.404722.73116.9388
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)49.893832.210667.352459.0409
NODDeveloping tillers at six leaf stage, 3rd internode4.948251.416331.507786.21668
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.7859791.369270.2388972.74089



CDS Structure of MLOC_48347






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48347.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48347.1CUST_6817_PI427708083AvailableAvailablecontig_321856 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g38710.1 +3 4e-19 81 38/56 (68%) 13110.m03526 protein glutathione S-transferase, putative, expressed
TAIR PP10 AT2G29480.1 +3 2e-13 64 35/56 (63%) | Symbols: ATGSTU2, GST20, GSTU2 | glutathione S-transferase tau 2 | chr2:12630382-12631232 REVERSE LENGTH=225