- Predicted Gene MLOC_48347
MLOC_48347 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48347_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48347_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.13843 | 5.80444 | 9.03132 | 8.41028 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.16092 | 19.4047 | 22.731 | 16.9388 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 49.8938 | 32.2106 | 67.3524 | 59.0409 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.94825 | 1.41633 | 1.50778 | 6.21668 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.785979 | 1.36927 | 0.238897 | 2.74089 |
CDS Structure of MLOC_48347
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48347.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g38710.1 |
+3 |
4e-19 |
81 |
38/56 (68%) |
13110.m03526 protein glutathione S-transferase, putative, expressed |
TAIR PP10 |
AT2G29480.1 |
+3 |
2e-13 |
64 |
35/56 (63%) |
| Symbols: ATGSTU2, GST20, GSTU2 | glutathione S-transferase tau 2 | chr2:12630382-12631232 REVERSE LENGTH=225 |