- Predicted Gene MLOC_48344
MLOC_48344 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.4663 | 5.57307 | 3.63052 | 4.81099 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.4414 | 13.7309 | 21.2279 | 14.8627 |
| INF1 | Young developing inflorescences (5mm) | 1.84168 | 1.98497 | 2.1981 | 1.75517 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.637757 | 0.773821 | 0.962913 | 0.913771 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.87988 | 0.791487 | 0.828484 | 0.988634 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 15.2883 | 22.2777 | 30.0543 | 80.6634 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.31046 | 1.98359 | 2.27926 | 2.28422 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0319493 | 0.215533 | 0.0463117 | 0.276509 |
CDS Structure of MLOC_48344
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48344.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g05080.1 |
+3 |
1e-91 |
280 |
161/171 (94%) |
13101.m00481 protein thylakoid lumenal protein, putative, expressed |
| TAIR PP10 |
AT2G44920.2 |
+3 |
6e-83 |
257 |
126/142 (89%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:18524419-18526502 FORWARD LENGTH=224 |