MLOC_48332 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.6612640.7527130
LEAShoots from the seedlings (10 cm shoot stage)0.8886271.5561100
INF1Young developing inflorescences (5mm)0.977081.61931.41380
INF2Developing inflorescences (1-1.5 cm)2.62282.075482.268560
ROORoots from the seedlings (10 cm shoot stage)1.645340.36413600
NODDeveloping tillers at six leaf stage, 3rd internode0.1448220.962250.6654670
CAR5Developing grain, bracts removed (5 DPA)2.337592.40841.890370
CAR15Developing grain, bracts removed (15 DPA)0.9823850.8698310.7143220



CDS Structure of MLOC_48332






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK363837
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363837NoneNoneNoneNone
MLOC_25629.1NoneAvailableNonecontig_170373 (Mapped)
MLOC_25915.1NoneAvailableNonecontig_172141 (Mapped)
MLOC_26342.1NoneAvailableNonecontig_1750031 (Not mapped)
MLOC_29724.1NoneAvailableNonecontig_2031206 (Not mapped)
MLOC_31920.1NoneAvailableNonecontig_2235192 (Not mapped)
MLOC_33153.1NoneAvailableNonecontig_2348720 (Mapped)
MLOC_47521.1NoneAvailableNonecontig_307394 (Not mapped)
MLOC_48332.1NoneAvailableNonecontig_321541 (Not mapped)
MLOC_48596.1NoneAvailableNonecontig_326472 (Mapped)
MLOC_48717.1NoneAvailableAvailablecontig_328372 (Not mapped)
MLOC_53019.1NoneAvailableNonecontig_379933 (Mapped)
MLOC_6984.1NoneAvailableNonecontig_1384356 (Not mapped)
MLOC_77072.1NoneAvailableNonecontig_741794 (Not mapped)
MLOC_783.1NoneAvailableNonecontig_1060363 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----