MLOC_48316 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.369371.92531.869780
LEAShoots from the seedlings (10 cm shoot stage)6.464910.9100974.585390
INF1Young developing inflorescences (5mm)1.971831.47960.6596970
INF2Developing inflorescences (1-1.5 cm)0.6186281.392530.5218520
ROORoots from the seedlings (10 cm shoot stage)00.989090.4465420
NODDeveloping tillers at six leaf stage, 3rd internode1.435180.621051.350650
CAR5Developing grain, bracts removed (5 DPA)2.604273.247522.294460
CAR15Developing grain, bracts removed (15 DPA)0.1175920.13647400



CDS Structure of MLOC_48316






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK357630
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357630CUST_19841_PI427708080NoneNoneNone
MLOC_48316.1NoneAvailableNonecontig_32116 (Not mapped)
MLOC_72696.1NoneAvailableAvailablecontig_62158 (Mapped)
MLOC_81646.1NoneAvailableNonecontig_9741 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----