MLOC_48278 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)00.57419200
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode00.1958060.3643860
CAR5Developing grain, bracts removed (5 DPA)00.6631160.2507380
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_48278






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK372284
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372284CUST_14347_PI427708083NoneNoneNone
MLOC_22152.1NoneAvailableNonecontig_160309 (Mapped)
MLOC_29285.1NoneAvailableNonecontig_1991571 (Not mapped)
MLOC_48278.1NoneAvailableNonecontig_320567 (Mapped)
MLOC_53042.3NoneAvailableNonecontig_380102 (Not mapped)
MLOC_56484.1NoneAvailableNonecontig_408810 (Not mapped)
MLOC_57370.2NoneAvailableAvailablecontig_41692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----