MLOC_48261 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains03.4958500
LEAShoots from the seedlings (10 cm shoot stage)02.180411.880130
INF1Young developing inflorescences (5mm)1.19151000
INF2Developing inflorescences (1-1.5 cm)2.73.343514.942470
ROORoots from the seedlings (10 cm shoot stage)004.138440
NODDeveloping tillers at six leaf stage, 3rd internode00.14552500
CAR5Developing grain, bracts removed (5 DPA)02.028511.285120
CAR15Developing grain, bracts removed (15 DPA)1.353511.394754.01310



CDS Structure of MLOC_48261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356745
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356745CUST_23944_PI427708080NoneNoneNone
MLOC_24630.1NoneAvailableNonecontig_1649502 (Mapped)
MLOC_30030.1NoneAvailableNonecontig_2058131 (Mapped)
MLOC_48261.1NoneAvailableNonecontig_320324 (Mapped)
MLOC_79897.1NoneAvailableAvailablecontig_874766 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----