- Predicted Gene MLOC_48186
MLOC_48186 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.3781 | 4.03524 | 4.80891 | 6.2707 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.15324 | 1.50387 | 0.365445 | 1.29983 |
| INF1 | Young developing inflorescences (5mm) | 8.16201 | 14.8125 | 12.4145 | 14.5201 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.87702 | 10.8397 | 8.90824 | 16.4681 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.17598 | 1.85882 | 4.86117 | 4.10188 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.267279 | 0.145259 | 0.419229 | 0.686786 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.51345 | 2.14279 | 4.29646 | 3.81333 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.298853 | 0.169433 | 0.2173 | 0.863706 |
CDS Structure of MLOC_48186
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48186.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g17100.1 |
+2 |
9e-30 |
107 |
68/81 (84%) |
13103.m02043 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed |
| TAIR PP10 |
AT5G02560.1 |
+2 |
2e-28 |
103 |
67/81 (83%) |
| Symbols: HTA12 | histone H2A 12 | chr5:575437-576456 FORWARD LENGTH=153 |