MLOC_4818 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.431225.933375.072625.89503
LEAShoots from the seedlings (10 cm shoot stage)4.309483.462944.728173.45737
INF1Young developing inflorescences (5mm)9.9855111.037211.579.2163
INF2Developing inflorescences (1-1.5 cm)8.998189.120778.99559.73737
ROORoots from the seedlings (10 cm shoot stage)6.03496.396825.477427.13622
NODDeveloping tillers at six leaf stage, 3rd internode0.8929661.01212.864344.0551
CAR5Developing grain, bracts removed (5 DPA)6.839256.929718.48717.02693
CAR15Developing grain, bracts removed (15 DPA)3.757134.194842.759748.6658



CDS Structure of MLOC_4818






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4818.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371515NoneNoneNoneNone
MLOC_4818.1CUST_308_PI427708080AvailableAvailablecontig_135539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g08850.1 -3 4e-179 516 258/361 (71%) 13101.m00940 protein expressed protein
TAIR PP10 AT5G11010.3 -3 9e-105 324 177/356 (50%) Pre-mRNA cleavage complex II protein family | chr5:3484176-3486067 FORWARD LENGTH=368