MLOC_48176 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.349313.457513.96960
LEAShoots from the seedlings (10 cm shoot stage)37.785950.998978.60540
INF1Young developing inflorescences (5mm)5.977238.299712.17940
INF2Developing inflorescences (1-1.5 cm)6.814548.967178.67310
ROORoots from the seedlings (10 cm shoot stage)14.296216.528816.84960
NODDeveloping tillers at six leaf stage, 3rd internode63.050767.984431.9070
CAR5Developing grain, bracts removed (5 DPA)20.048419.55818.32280
CAR15Developing grain, bracts removed (15 DPA)2.923082.451462.883150



CDS Structure of MLOC_48176






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374914
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374914CUST_22740_PI427708080NoneNoneNone
MLOC_43406.1NoneAvailableNonecontig_270106 (Not mapped)
MLOC_48176.1NoneAvailableNonecontig_318946 (Mapped)
MLOC_74066.1NoneAvailableAvailablecontig_65098 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----