MLOC_48158 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains84.187682.576292.34250
LEAShoots from the seedlings (10 cm shoot stage)162.573249.211255.1310
INF1Young developing inflorescences (5mm)28.120341.058243.50210
INF2Developing inflorescences (1-1.5 cm)29.215326.74531.27580
ROORoots from the seedlings (10 cm shoot stage)120.92567.649853.85540
NODDeveloping tillers at six leaf stage, 3rd internode75.6461158.267101.1370
CAR5Developing grain, bracts removed (5 DPA)15.750117.120617.42520
CAR15Developing grain, bracts removed (15 DPA)2.93992.224621.931090



CDS Structure of MLOC_48158






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248906.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248906.1CUST_18623_PI427708080NoneNoneNone
MLOC_31971.4NoneAvailableNonecontig_223946 (Mapped)
MLOC_32109.3NoneAvailableNonecontig_225323 (Mapped)
MLOC_47339.1NoneAvailableNonecontig_304414 (Mapped)
MLOC_48158.1NoneAvailableNonecontig_318621 (Mapped)
MLOC_49352.1NoneAvailableNonecontig_340230 (Mapped)
MLOC_56781.1NoneAvailableNonecontig_411449 (Not mapped)
MLOC_74541.1NoneAvailableAvailablecontig_66062 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----