MLOC_48116 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.010582.12522.068512.15045
LEAShoots from the seedlings (10 cm shoot stage)1.630760.7151740.5053280.792422
INF1Young developing inflorescences (5mm)13.499716.233617.162812.1848
INF2Developing inflorescences (1-1.5 cm)13.642217.361617.467916.4166
ROORoots from the seedlings (10 cm shoot stage)1.658062.656682.81712.68696
NODDeveloping tillers at six leaf stage, 3rd internode0.258690.3350070.4191391.09269
CAR5Developing grain, bracts removed (5 DPA)0.8967610.8582320.7490970.753508
CAR15Developing grain, bracts removed (15 DPA)0.184270.06493730.4029790.409887



CDS Structure of MLOC_48116






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_48116.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_48116.1CUST_12585_PI427708083AvailableAvailablecontig_317719 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g70260.2 +2 9e-32 128 80/101 (79%) 13101.m07628 protein receptor-like protein kinase 2 precursor, putative, expressed
TAIR PP10 AT5G13290.1 +2 7e-25 107 66/101 (65%) | Symbols: SOL2, CRN | Protein kinase superfamily protein | chr5:4252924-4254215 REVERSE LENGTH=376