- Predicted Gene MLOC_48103
MLOC_48103 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48103_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48103_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.54033 | 1.16373 | 3.55376 | 3.31513 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.97266 | 0 | 1.91685 | 1.8992 |
INF1 | Young developing inflorescences (5mm) | 4.53421 | 4.87471 | 4.85029 | 5.9588 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.52699 | 3.76131 | 4.37419 | 8.80004 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 1.72428 | 3.32084 | 4.01948 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.410089 | 0.244824 | 0.41117 | 1.84467 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.4329 | 2.81142 | 3.55605 | 3.90468 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.427508 | 0.799231 | 0.209901 | 2.55637 |
CDS Structure of MLOC_48103
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48103.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g02150.2 |
-2 |
1e-40 |
142 |
73/91 (80%) |
13104.m00133 protein tRNA methyltransferase, putative, expressed |
TAIR PP10 |
AT2G45730.1 |
-2 |
1e-29 |
110 |
53/77 (69%) |
eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446 |