- Predicted Gene MLOC_48070
MLOC_48070 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_48070_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_48070_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 176.214 | 200.742 | 225.907 | 165.42 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 143.655 | 125.766 | 148.68 | 102.73 |
INF1 | Young developing inflorescences (5mm) | 60.8156 | 52.9771 | 53.0301 | 38.4747 |
INF2 | Developing inflorescences (1-1.5 cm) | 39.9302 | 42.7164 | 43.6124 | 38.1626 |
ROO | Roots from the seedlings (10 cm shoot stage) | 133.307 | 154.611 | 136.075 | 147.212 |
NOD | Developing tillers at six leaf stage, 3rd internode | 201.671 | 170.736 | 187.61 | 487.395 |
CAR5 | Developing grain, bracts removed (5 DPA) | 96.4675 | 99.8811 | 102.753 | 79.0285 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.275 | 20.7422 | 23.4096 | 37.762 |
CDS Structure of MLOC_48070
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48070.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g36470.1 |
+3 |
0.0 |
592 |
289/314 (92%) |
13107.m03746 protein vacuolar ATP synthase subunit H, putative, expressed |
TAIR PP10 |
AT3G42050.1 |
+3 |
0.0 |
659 |
317/442 (72%) |
vacuolar ATP synthase subunit H family protein | chr3:14228846-14232228 REVERSE LENGTH=441 |