MLOC_48054 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.184611.782413.128812.5804
LEAShoots from the seedlings (10 cm shoot stage)14.66379.9526612.500110.2252
INF1Young developing inflorescences (5mm)25.540626.334230.213426.1647
INF2Developing inflorescences (1-1.5 cm)43.481943.745242.037652.1141
ROORoots from the seedlings (10 cm shoot stage)11.96912.153114.738714.995
NODDeveloping tillers at six leaf stage, 3rd internode8.823314.364418.612840.5968
CAR5Developing grain, bracts removed (5 DPA)30.145826.468429.443931.7665
CAR15Developing grain, bracts removed (15 DPA)12.21258.934649.9679528.1968



CDS Structure of MLOC_48054






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK357043
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357043NoneNoneNoneNone
MLOC_1105.1NoneAvailableNonecontig_1093915 (Not mapped)
MLOC_31410.1NoneAvailableNonecontig_2187258 (Not mapped)
MLOC_32044.1NoneAvailableNonecontig_2247078 (Not mapped)
MLOC_32333.1NoneAvailableNonecontig_2276726 (Mapped)
MLOC_32407.1NoneAvailableNonecontig_228317 (Mapped)
MLOC_41160.1NoneAvailableNonecontig_2574787 (Not mapped)
MLOC_48054.1NoneAvailableAvailablecontig_31689 (Not mapped)
MLOC_59760.2NoneAvailableNonecontig_438880 (Not mapped)
MLOC_62250.1NoneAvailableNonecontig_463512 (Not mapped)
MLOC_69315.1NoneAvailableNonecontig_562349 (Not mapped)
MLOC_75734.1NoneAvailableNonecontig_687773 (Not mapped)
MLOC_77942.1NoneAvailableNonecontig_780123 (Not mapped)
MLOC_79580.1NoneAvailableNonecontig_857541 (Not mapped)
MLOC_80945.1NoneAvailableNonecontig_937083 (Not mapped)
MLOC_81317.1NoneAvailableNonecontig_957109 (Not mapped)
MLOC_81920.1NoneAvailableNonecontig_989826 (Not mapped)
MLOC_8216.1NoneAvailableNonecontig_1416251 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----