- Predicted Gene MLOC_48050
MLOC_48050 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 20.658 | 35.4514 | 33.9668 | 34.9358 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 35.9669 | 39.21 | 19.5933 | 30.7954 |
| INF1 | Young developing inflorescences (5mm) | 52.316 | 54.8652 | 55.8425 | 51.5426 |
| INF2 | Developing inflorescences (1-1.5 cm) | 57.1507 | 57.3247 | 40.6584 | 74.4795 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.7651 | 20.1151 | 28.8902 | 31.2773 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 26.5692 | 19.7598 | 22.0459 | 78.5951 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.5254 | 26.1507 | 29.3581 | 33.5669 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 25.6724 | 23.4133 | 26.4141 | 66.26 |
CDS Structure of MLOC_48050
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48050.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g09120.1 |
+3 |
2e-24 |
97 |
46/55 (84%) |
13112.m00966 protein mRNA-capping enzyme, putative, expressed |
| TAIR PP10 |
AT3G09100.1 |
+3 |
2e-12 |
62 |
28/41 (68%) |
mRNA capping enzyme family protein | chr3:2790038-2792913 REVERSE LENGTH=471 |