MLOC_48031 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1132.56718.609695.3690
LEAShoots from the seedlings (10 cm shoot stage)405.852190.608226.2740
INF1Young developing inflorescences (5mm)9261000.021031.310
INF2Developing inflorescences (1-1.5 cm)648.181668.134606.0440
ROORoots from the seedlings (10 cm shoot stage)802.661524.92520.3840
NODDeveloping tillers at six leaf stage, 3rd internode108.444183.729173.6380
CAR5Developing grain, bracts removed (5 DPA)800.498750.125834.8040
CAR15Developing grain, bracts removed (15 DPA)467.983458.046391.2730



CDS Structure of MLOC_48031






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248954.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248954.1CUST_18628_PI427708080NoneNoneNone
MLOC_3679.4NoneAvailableAvailablecontig_132622 (Mapped)
MLOC_40952.1NoneAvailableNonecontig_2567264 (Mapped)
MLOC_48031.1NoneAvailableNonecontig_31647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----