- Predicted Gene MLOC_48013
MLOC_48013 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.38187 | 12.5092 | 8.65535 | 6.25285 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.04928 | 4.03007 | 3.23018 | 3.23164 |
| INF1 | Young developing inflorescences (5mm) | 1.32816 | 0.735772 | 1.28466 | 0.765843 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.35942 | 1.32305 | 0.690022 | 1.07338 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.163146 | 0.375088 | 0 | 0.54293 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.05337 | 1.08864 | 1.62088 | 3.27884 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.75398 | 2.05545 | 1.91565 | 1.48505 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.975338 | 0.435007 | 0.793682 | 1.29416 |
CDS Structure of MLOC_48013
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_48013.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g24530.1 |
-2 |
3e-32 |
126 |
61/74 (82%) |
13109.m02328 protein ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G14030.1 |
-2 |
9e-22 |
95 |
46/76 (61%) |
Rubisco methyltransferase family protein | chr1:4805493-4807440 REVERSE LENGTH=482 |