- Predicted Gene MLOC_47993
MLOC_47993 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.117902 | 1.00195 | 1.25517 | 0.881645 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.13508 | 1.67056 | 1.20136 | 1.11436 |
| INF1 | Young developing inflorescences (5mm) | 3.41792 | 1.95208 | 3.18622 | 2.50108 |
| INF2 | Developing inflorescences (1-1.5 cm) | 2.28215 | 3.88568 | 3.69148 | 3.97536 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.221468 | 0 | 0.710285 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.231507 | 0.2395 | 0.358755 | 0.79269 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.86481 | 2.96449 | 3.76889 | 4.07065 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.12374 | 1.52143 | 1.28582 | 3.35892 |
CDS Structure of MLOC_47993
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47993.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g08810.1 |
-3 |
3e-32 |
123 |
79/111 (71%) |
13107.m00875 protein expressed protein |
| TAIR PP10 |
AT5G48520.1 |
-3 |
8e-18 |
82 |
53/111 (48%) |
unknown protein; Has 609 Blast hits to 593 proteins in 129 species: Archae - 0; Bacteria - 41; Metazoa - 390; Fungi - 40; Plants - 64; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). | chr5:19661407-19666147 FORWARD LENGTH=617 |