- Predicted Gene MLOC_47961
MLOC_47961 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.02972 | 1.51395 | 2.01862 | 1.09525 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.15022 | 1.68258 | 2.65756 | 1.76116 |
| INF1 | Young developing inflorescences (5mm) | 2.83708 | 4.47049 | 5.38747 | 2.43404 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.56873 | 5.20035 | 5.07828 | 4.52374 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.803818 | 2.14824 | 1.30105 | 1.57325 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.297785 | 0.426974 | 0.879786 | 1.26382 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.38005 | 5.9401 | 5.22733 | 3.72641 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.04625 | 2.44223 | 2.68675 | 4.70362 |
CDS Structure of MLOC_47961
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47961.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g61560.1 |
-3 |
4e-59 |
165 |
85/122 (70%) |
13103.m06778 protein expressed protein |
| TAIR PP10 |
AT3G16810.1 |
-3 |
2e-27 |
84 |
44/117 (38%) |
| Symbols: APUM24, PUM24 | pumilio 24 | chr3:5723436-5727539 REVERSE LENGTH=641 |