MLOC_47936 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.1994211.854312.50050
LEAShoots from the seedlings (10 cm shoot stage)12.00410.46238.330130
INF1Young developing inflorescences (5mm)11.349611.397910.31360
INF2Developing inflorescences (1-1.5 cm)10.550610.39067.026470
ROORoots from the seedlings (10 cm shoot stage)11.69039.0678912.29670
NODDeveloping tillers at six leaf stage, 3rd internode5.371456.604275.025470
CAR5Developing grain, bracts removed (5 DPA)11.727111.67128.724170
CAR15Developing grain, bracts removed (15 DPA)2.773494.02183.581520



CDS Structure of MLOC_47936






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248501.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248501.1CUST_23183_PI427708080NoneNoneNone
MLOC_47936.1NoneAvailableNonecontig_314878 (Mapped)
MLOC_50845.1NoneAvailableNonecontig_366982 (Mapped)
MLOC_73421.1NoneAvailableNonecontig_636093 (Not mapped)
MLOC_79959.3NoneAvailableAvailablecontig_8785 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----