MLOC_47917 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.195290.3529692.063780
LEAShoots from the seedlings (10 cm shoot stage)1.8042402.881650
INF1Young developing inflorescences (5mm)00.66984500
INF2Developing inflorescences (1-1.5 cm)2.990682.804312.442640
ROORoots from the seedlings (10 cm shoot stage)00.7649321.108370
NODDeveloping tillers at six leaf stage, 3rd internode000.08929270
CAR5Developing grain, bracts removed (5 DPA)3.835093.461872.538860
CAR15Developing grain, bracts removed (15 DPA)0.3154391.0248300



CDS Structure of MLOC_47917






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK353744
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353744NoneNoneNoneNone
MLOC_32206.3NoneAvailableNonecontig_226228 (Mapped)
MLOC_41998.1NoneAvailableAvailablecontig_261758 (Mapped)
MLOC_41999.1NoneAvailableNonecontig_261758 (Mapped)
MLOC_46534.3NoneAvailableNonecontig_291763 (Mapped)
MLOC_47917.1NoneAvailableNonecontig_314541 (Not mapped)
MLOC_49425.1NoneAvailableNonecontig_341434 (Not mapped)
MLOC_74644.1NoneAvailableNonecontig_66248 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----