MLOC_47904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.3564811.815610.739910.6236
LEAShoots from the seedlings (10 cm shoot stage)9.178666.821323.339295.03612
INF1Young developing inflorescences (5mm)16.45279.145779.0764110.1173
INF2Developing inflorescences (1-1.5 cm)3.458463.631583.149263.80592
ROORoots from the seedlings (10 cm shoot stage)38.153859.333835.357955.5308
NODDeveloping tillers at six leaf stage, 3rd internode5.24522.864862.066366.53232
CAR5Developing grain, bracts removed (5 DPA)0.8792331.565921.322961.22035
CAR15Developing grain, bracts removed (15 DPA)0.069992500.05040620.15372



CDS Structure of MLOC_47904






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK252705.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252705.1CUST_19185_PI427708080NoneNoneNone
MLOC_38733.1NoneAvailableNonecontig_2551220 (Mapped)
MLOC_40272.1NoneAvailableNonecontig_2557739 (Not mapped)
MLOC_47904.1NoneAvailableAvailablecontig_314305 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----