- Predicted Gene MLOC_47898
MLOC_47898 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 22.9776 | 13.3237 | 16.3163 | 15.4317 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3547 | 11.8732 | 5.46852 | 6.94285 |
| INF1 | Young developing inflorescences (5mm) | 7.23191 | 12.8389 | 11.3037 | 8.19668 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.6909 | 9.62535 | 11.0355 | 10.6228 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 67.8471 | 32.1167 | 47.7847 | 40.1496 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 17.285 | 11.6611 | 23.4495 | 35.1149 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.8743 | 13.7476 | 15.4001 | 12.7674 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 47.7193 | 52.1932 | 50.8141 | 109.951 |
CDS Structure of MLOC_47898
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_47898.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g30600.1 |
-1 |
8e-32 |
118 |
53/69 (77%) |
13102.m03340 protein conserved hypothetical protein |
| TAIR PP10 |
AT5G40970.1 |
-1 |
7e-28 |
106 |
46/69 (67%) |
Protein of unknown function (DUF 3339) | chr5:16414081-16414290 FORWARD LENGTH=69 |