MLOC_47839 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.97389.7605711.65450
LEAShoots from the seedlings (10 cm shoot stage)10.1595.7616811.14750
INF1Young developing inflorescences (5mm)13.841617.744518.45240
INF2Developing inflorescences (1-1.5 cm)19.643323.279419.35550
ROORoots from the seedlings (10 cm shoot stage)14.310815.240612.70190
NODDeveloping tillers at six leaf stage, 3rd internode8.019812.714112.44150
CAR5Developing grain, bracts removed (5 DPA)26.241327.583428.30090
CAR15Developing grain, bracts removed (15 DPA)8.505658.300069.485050



CDS Structure of MLOC_47839






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374036
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374036CUST_25819_PI427708080NoneNoneNone
MLOC_47839.1NoneAvailableNonecontig_313105 (Not mapped)
MLOC_53279.1NoneAvailableAvailablecontig_38200 (Mapped)
MLOC_8646.2NoneAvailableNonecontig_145061 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----